Keyword: Transcriptome analysis
Showing items 1 to 46 of 46.
| Title | Author and Source | Category | View TGIF Record |
|---|---|---|---|
| Transcriptomic and metabolomic analysis reveal differentially expressed genes and metabolic pathways in bermudagrass under drought stress |
Seelam, Ravi Teja; Jespersen, David. 2025. Crop Science. January/February. 65(1): p. e21412 [1-18]. |
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342776 |
| Specialization of the stems into shoots, stolons, and rhizomes in bermudagrass (Cynodon dactylon L.): Insights from combined metabolome and transcriptome analyses Access Restrictions |
Ma, Ziyan; Yuan, Shuai; Chen, Jingbo; Zhang, Bing. 2024. Journal of Plant Growth Regulation. December. 43(12): p. 4608-4620. |
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341625 |
| Transcriptional regulation and expression networks involving exogenous nitric oxide in Kentucky bluegrass under cadmium stress Access Restrictions |
Xian, Jingping; Wang, Yong; Niu, Kuiju; Ma, Huiling. 2024. South African Journal of Botany. November. 174: p. 634-644. |
|
340686 |
| Co-expression analyses reveal key Cd stress response-related metabolites and transcriptional regulators in Kentucky blluegrass Access Restrictions |
Wang, Yong; Cui, Ting; Niu, Kuiju; Ma, Huiling. 2024. Chemosphere. September. 363: p. 142937 [1-17]. |
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340675 |
| Identification of Shaker potassium channel family members and functional characterization of SsKAT1.1 in Stenotaphrum secundatum suggest that SsKAT1.1 contributes to cold resistance |
Hao, Dong-Li; Qu, Jia; Wang, Zhi-Yong; Sun, Dao-Jin; Yang, Sheng-Nan; Liu, Jian-Xiu; Zong, Jun-Qin; Lu, Hai-Long. 2024. International Journal of Molecular Sciences. September. 25(17): p. 9480 [1-18]. |
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340656 |
| Genome-wide identification and expression analysis of the PUB gene family in Zoysia japonica under salt stress |
Sun, Daojin; Xu, Jingya; Wang, Haoran; Guo, Hailin; Chen, Yu; Zhang, Ling; Li, Jianjian; Hao, Dongli; Yao, Xiang; Li, Xiaohui. 2024. Plants. March. 13(6): p. 788 [1-16]. |
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336742 |
| Characterization of an antifungal protein from the fungal endophyte of strong creeping red fescue with activity against the dollar spot pathogen | Belanger, Faith C.; Clarke, Bruce B. 2023. Mike Davis Program for Advancing Golf Course Management: 2023 Progress Reports. p. 1-5. |
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336570 |
| Transcriptome analysis of bentgrass germplasm using RNA-seq to identify novel targets for enhancement of dollar spot resistance in the field | Horvath, Brandon; Warnke, Scott; Amundsen, Keenan. 2023. Mike Davis Program for Advancing Golf Course Management: 2023 Progress Reports. p. 6-9. |
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336577 |
| New discoveries and methods for complex data analysis | Amundsen, Keenan. 2023. Mike Davis Program for Advancing Golf Course Management: 2023 Progress Reports. p. 68-70. |
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336584 |
| Integration analysis of full-length transcriptomics and metabolomics provides new insights into the mechanism of sex differentiation in buffalograss (Buchloe dactyloides) |
Guan, Jin; Yue, Yuesen; Yin, Shuxia; Teng, Wenjun; Zhang, Hui; Wen, Haifeng; Wu, Juying; Teng, Ke; Fan, Xifeng. 2023. Grass Research. 3: p. 24 [1-17]. |
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337819 |
| Transcriptomic analysis of zoysiagrass (Zoysia japonica) provides novel insights into the molecular basis of cold acclimation |
Brown, Jessica M.; Weldt, Caroline Escalona; Holloway, H. McCamy P.; Tuong, Tan D.; Patton, Aaron J.; DaCosta, Michelle; Livingston, David P.; Yu, Xingwang; Milla-Lewis, Susana R. 2023. Grass Research. 3: p. 25 [1-9]. |
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337820 |
| Transcriptome analysis of bentgrass germplasm using RNA-seq to identify novel targets for enhancement of dollar spot resistance in the field | Horvath, Brandon; Warnke, Scott; Amundsen, Keenan. 2022. Mike Davis Program for Advancing Golf Course Management: 2022 Progress Reports. p. 7-12. |
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328653 |
| Transcriptome characterization of candidate genes for heat tolerance in perennial ryegrass after exogenous methyl jasmonate application |
Nie, Gang; Zhou, Jie; Jiang, Yiwei; He, Jie; Wang, Yang; Liao, Zongchao; Appiah, Charlotte; Li, Dandan; Feng, Guangyan; Huang, Linkai; Wang, Xia; Zhang, Xinquan. 2022. BMC Plant Biology. 22: p. 68 [1-16]. |
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336688 |
| Single-molecule long-read sequencing analysis improves genome annotation and sheds new light on the transcripts and splice isoforms of Zoysia japonica |
Guan, Jin; Yin, Shuxia; Yue, Yuesen; Liu, Lingyun; Guo, Yidi; Zhang, Hui; Fan, Xifeng; Teng, Ke. 2022. BMC Plant Biology. 22: p. 263 [1-17]. |
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336689 |
| Seed germination mechanism of Carex rigescens under variable temperature determinded using integrated single-molecule long-read and Illumina sequence analysis |
Li, Hui; Teng, Ke; Yue, Yuesen; Teng, Wenjun; Zhang, Hui; Wen, Haifeng; Wu, Juying; Fan, Xifeng. 2022. Frontiers in Plant Science. 13: p. 818458 [1-15]. |
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336910 |
| A high-quality haplotype-resolved genome of common bermudagrass (Cynodon dactylon L.) provides insights into polyploid genome stability and prostrate growth |
Zhang, Bing; Chen, Si; Liu, Jianxiu; Yan, Yong-Bin; Chen, Jingbo; Li, Dandan; Liu, Jin-Yuan. 2022. Frontiers in Plant Science. 13: p. 890980 [1-15]. |
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336912 |
| The combination and RNA-seq transcriptomics and data-independent acquisition proteomics reveals the mechanisms underlying enhancing salt tolerance by the ZmPDI gene Zoysia matrella [L.] Merr. |
Ming, Qiang; Wang, Kai; Wang, Jingjing; Liu, Jianxiu; Li, Xiaohui; Wei, Peipei; Guo, Hailin; Chen, Jingbo; Zong, Junqin. 2022. Frontiers in Plant Science. 13: p. 970651 [1-14]. |
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336925 |
| Transcriptome analysis of perennial ryegrass reveals the regulatory role of Aspergillus aculeatus under salt stress Access Restrictions |
Li, Xiaoning; Fan, Shugao; Cui, Xinyu; Shao, An; Wang, Wei; Xie, Yan; Fu, Jinmin. 2022. Physiologia Plantarum. November/December. 174(6): p. e13805 [1-12]. |
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336680 |
| Comparative transcriptome analysis of resistant and susceptible Kentucky bluegrass varieties in response to powdery mildew infection |
Zhang, Yujuan; Dong, Wenke; Zhao, Chunxu; Ma, Huiling. 2022. BMC Plant Biology. November 2. 22: p. 509 [1-19]. |
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327538 |
| Integrated physiological and transcriptomic analyses reveal differential photosynthetic responses to low-light stress in tall fescue cultivars Access Restrictions |
Long, Si; Liu, Qian; Guo, Huan; Li, Xuan; You, Xiangkai; Liu, Bowen; Gao, Shuanghong; Wen, Suyun; Liu, Tie-Yuan; Xu, Yuefei. 2022. Scientia Horticulturae. October 15. 304: p. 111343 [1-13]. |
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324000 |
| Transcriptomic profiling revealed the role of 24-epibrassinolide in alleviating salt stress damage in tall fescue (Festuca arundinacea) |
Chen, Yao; Xiang, Yuanhang; Hu, Zhengrong; Gao, Yang; Zhang, Youxin; Chen, Minghui; Khaldun, A. B. M.; Yan, Xuebing; Fan, Jibiao. 2022. Frontiers in Plant Science. September. 13: p. 976341 [1-15]. |
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323430 |
| Transcriptome analysis reveals the stress tolerance to and accumulation mechanisms of cadmium in Paspalum vaginatum Swartz |
Xu, Lei; Zheng, Yuying; Yu, Qing; Liu, Jun; Yang, Zhimin; Chen, Yu. 2022. Plants. August. 11(10): p. 2078 [1-17]. |
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324574 |
| Comparative transcriptome analyses reveal conserved and distinct mechanisms of the SDHI fungicide benzovindiflupyr inhibiting Colletotrichum Access Restrictions |
Liang, Xiaoyu; Zou, Lijun; Lian, Wenxu; Wang, Meng; Yang, Ye; Zhang, Yu. 2022. Phytopathology. June. 112(6): p. 1255-1263. |
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319866 |
| Lanthanum promotes Bahiagrass (Paspalum notatum) roots growth by improving root activity, photosynthesis and respiration |
Liu, Ying; Zhang, Juming. 2022. Plants. February 1. 11(3): p. 382 [1-15]. |
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339419 |
| A survey of enhanced cold tolerance and low-temperature-induced anthocyanin accumulation in a novel Zoysia japonica biotype |
Jin, Hai-Xiang; Jiang, Ming; Yang, Jian-Feng; Wu, Zhi-Hao; Ma, Long-Long; Wang, Cong-Cong; Liang, Chen; Ning, Xin-Yi; Ge, Liang-Fa; Chen, Shu. 2022. Plants. February 1. 11(3): p. 429 [1-19]. |
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339416 |
| Transcriptome analysis revealed a positive role of ethephon on chlorophyll metabolism of Zoysia japonica under cold stress |
Zhang, Jiahang; Zhang, Zhiwei; Liu, Wen; Li, Lijing; Han, Liebao; Xu, Lixin; Zhao, Yuhong. 2022. Plants. February 1. 11(3): p. 442 [1-16]. |
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339415 |
| Integrated physiological and transcriptomic analyses of two warm- and cool-season turfgrass species in response to heat stress Access Restrictions |
Liu, Mengyao; Sun, Tianxiao; Liu, Chunling; Zhang, Hui; Wang, Weiliang; Wang, Yanping; Xiang, Lin; Chan, Zhulong. 2022. Plant Physiology and Biochemistry. January. 170: p. 275-286. |
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321201 |
| Integration of the metabolome and transcriptome reveals the mechanism of resistance to low nitrogen supply in wild bermudagrass (Cynodon dactylon (L.) Pers.) roots |
Li, Dandan; Liu, Jianxiu; Zong, Junqin; Guo, Hailin; Li, Jianjian; Wang, Jingjing; Wang, Haoran; Li, Ling; Chen, Jingbo. 2021. BMC Plant Biology. 21: p. 480 [1-14]. |
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336686 |
| Underexpression of PpDXS1 gene decreased plant height and resulted in altered accumulation of phytohormones in Kentucky bluegrass |
Gan, Lu; Chao, Yuehui; Han, Liebao; Yin, Shuxia. 2021. Grass Research. 1: p. 9 [1-12]. |
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337741 |
| Comparative transcriptomics and gene network analysis revealed secondary metabolism as preeminent metabolic pathways for heat tolerance in hard fescue |
Xu, Yi; Rossi, Stephanie; Huang, Bingru. 2021. Grass Research. 1: p. 12 [1-10]. |
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337761 |
| Building a reference transcriptome for the hexaploid hard fescue turfgrass (Festuca brevipila) using a combination of PacBio Isoseq and Illumina sequencing |
Qiu, Yinjie; Yang, Ya; Hirsch, Cory D.; Watkins, Eric. 2021. Crop Science. July/August. 61(4): p. 2798-2811. |
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315933 |
| SMRT and Illumina RNA sequencing reveal novel insights into the heat stress response and crosstalk with leaf senescence in tall fescue |
Qian, Yiguang; Cao, Liwen; Zhang, Qiang; Amee, Maurice; Chen, Ke; Chen, Liang. 2020. BMC Plant Biology. 20: p. 366 [1-19]. |
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336560 |
| Genome-wide small RNA profiling reveals tiller development in tall fescue (Festuca arundinacea Schreb) |
Hu, Tao; Wang, Tao; Li, Huiying; Wassie, Misganaw; Xu, Huawei; Chen, Liang. 2020. BMC Genomics. October. 21: p. 696 [1-13]. |
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321609 |
| Grass secondary cell walls, Brachypodium distachyon as a model for discovery |
Coomey, Joshua H.; Sibout, Richard; Hazen, Samuel P. 2020. New Phytologist. September. 227(6): p. 1649-1667. |
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313044 |
| Differential regulatory pathways associated with drought-inhibition and post-drought recuperation of rhizome development in perennial grass Access Restrictions |
Ma, Xiqing; Yu, Jingjin; Zhuang, Lili; Shi, Yi; Meyer, William; Huang, Bingru. 2020. Annals of Botany. 1 September. 126(3): p. 481-497. |
|
315322 |
| Comparative transcriptome combined with matabolome analyses revealed key factors involved in nitric oxide (NO)-regulated cadmium stress adaptation in tall fescue |
Zhu, Huihui; Ai, Honglian; Hu, Zhengrong; Du, Dongyun; Sun, Jie; Chen, Ke; Chen, Liang. 2020. BMC Genomics. August. 21: p. 1-13. |
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321608 |
| Comparative transcriptome profiling provides insights into plant salt tolerance in seashore paspalum (Paspalum vaginatum) |
Wu, Peipei; Cogill, Steven; Qiu, Yijan; Li, Zhigang; Zhou, Man; Hu, Qian; Chang, Zhihui; Luo, Hong; Noorai, Rooksana E.; Xia, Xiaoxia; Saski, Christopher; Raymer, Paul. 2020. BMC Genomics. February. 21: p. 1-16. |
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319685 |
| Transcriptome-guided identification and functional characterization of key terpene synthase involved in constitutive and methyl jasmonate-inducible volatile terpene formation in Eremochloa ophiuroides (Munro) Hack Access Restrictions |
Lee, Gun Woong; Chung, Moon-Soo; Lee, Seung Sik; Chung, Byung Yeoup; Lee, Sungbeom. 2019. Plant Physiology and Biochemistry. August. 141: p. 193-201. |
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336463 |
| Biosynthesis and signal transduction of ABA, JA, and BRs in response to drought stress of Kentucky bluegrass |
Chen, Yajun; Chen, Yang; Shi, Zhenjie; Jin, Yifeng; Sun, Huashan; Xie, Fuchun; Zhang, Lu. 2019. International Journal of Molecular Sciences. March 2. 20(6): p. 1289 [1-20]. |
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336433 |
| Transcriptomic analysis reveals unique molecular factors for lipid hydrolysis, secondary cell-walls and oxidative protection associated with thermotolerance in perennial grass |
Xu, Yi; Huang, Bingru. 2018. BMC Genomics. January. 19: p. 1-27. |
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321606 |
| Identification and expression profile of CYPome in perennial ryegrass and tall fescue in response to temperature stress |
Tao, Xiang; Wang, Ming-Xiu; Dai, Ya; Wang, Yan; Fan, Yan-Fen; Mao, Ping; Ma, Xin-Rong. 2017. Frontiers in Plant Science. 8: p. 519 [1-13]. |
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336997 |
| De novo transcriptome analysis of Rhizoctonia solani AG1 IA strain early invastion in Zoysia japonica root |
Zhu, Chen; Ai, Lin; Wang, Li; Yin, Pingping; Liu, Chenglan; Li, Shanshan; Zeng, Huiming. 2016. Frontiers in Microbiology. May 18. 7: p. 708 [1-12]. |
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331259 |
| RNA-seq for gene identification and transcript profiling in relation to root growth of bermudagrass (Cynodon dactylon) under salinity stress |
Hu, Longxing; Li, Huiying; Chen, Liang; Lou, Yanhong; Amombo, Erick; Fu, Jinmin. 2015. BMC Genomics. August. 16: p. 1-12. |
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321599 |
| Identification of defense-related genes in buffalograss associated with Curvularia inaequalis infection using high throughput sequencing |
Amaradasa, B. S.; Amundsen, K. 2014. Phytopathology. November. 104(11S): p. S3.7. |
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324967 |
| The genome and transcriptome of perennial ryegrass mitochondria |
Islam, Shofiqul; Studer, Bruno; Byrne, Stephen L.; Farrell, Jacqueline D.; Panitz, Frank; Bendixen, Christian; Møller, Ian Max; Asp, Torben. 2013. BMC Genomics. March. 14: p. 1-21. |
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321578 |
| A transcriptome map of perennial ryegrass Lolium perenne L.) |
Studer, Bruno; Byrne, Stephen; Nielsen, Rasmus O.; Panitz, Frank; Bendixen, Christian; Islam, Shofiqul; Pfeifer, Matthias; Lübberstedt, Thomas; Asp, Torben. 2012. BMC Genomics. April. 13: p. 140 [1-13]. |
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321291 |